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Exception chaining in Java

If you catch and rethrow exceptions in Java, you probably know about exception chaining already: You simply give the exception you “wrap” as second argument to your Exception like this

try { … }
catch (Exception e) {
throw new CustomException(“something went wrong”, e);
}

and if you look at the stack trace of the newly thrown exception, the original one is listed as “Caused by:”. Now today I had the rather “usual” use case of cleanup up a failing action and the cleanup itself was able to throw as well. So I had two causing exceptions and I wanted to conserve both of them, including their complete cause chain, in a new exception. Consider the following example:

try { … }
catch (Exception e1) {
try { … }
catch (Exception e2) {
// how to transport e1 and e2 in a new exception here?!
}
throw e1;
}

My idea here was to somehow tack the exception chain of `e1` onto the exception chain of `e2`, but Java offered no solution for this. So I hunted for my own one:

public static class ChainedException extends Exception {
public ChainedException(String msg, Throwable cause) {
super(msg, cause);
}
public void appendRootCause(Throwable cause) {
Throwable parent = this;
while (parent.getCause() != null) {
parent = parent.getCause();
}
parent.initCause(cause);
}
}

Now I only had to base the exceptions I actually want to chain on `ChainedException` and was able to do this (in fact I based all of them on this class):

try { … }
catch (ChainedException e1) {
try { … }
catch (ChainedException e2) {
e2.appendRootCause(e1);
throw new ChainedException(“cleanup failed”, e2);
}
throw e1;
}

Try it out yourself – you’ll see the trace of `e1` at the bottom of the cause chain of `e2`. Quite nice, eh?

guitone license change

[Guitone](http://guitone.thomaskeller.biz), my little GUI frontend for the [monotone SCM](http://www.monotone.ca), is currently licensed according to the terms of the GPLv3+ and was previously – before version 0.8 – licensed under GPLv2+. Newer development however forces me to re-license it again, this time under slightly less restrictive “copyleft” terms, under LGPLv3.

The reason for this is my usage of the [Graphviz library](http://www.graphviz.org) to render monotone revision trees. Graphviz is released under EPL (older versions under CPL even), and this license is strictly incompatible to any pure GPL version. I contacted the Graphviz guys and I also contacted the legal affairs support of the FSF and checked the options I had and the result is now that I have to adapt, one way or another. I could either use the “command line interface” of Graphviz or choose another license for guitone. I didn’t want to go the first route, simply because I have a working implementation and because I didn’t want to make slow calls into external binaries, so a new license had to be chosen on my side.

So, starting with the upcoming version 1.0 guitone is licensed under LGPLv3. I contacted the previous contributors of guitone and all parties are ok with the license change, so the actual license change will pop up in the [current development’s head shortly](https://code.monotone.ca/p/guitone/source/tree/h:net.venge.monotone.guitone/).

Thanks for your interest.

Access the Android menu in VirtualBox on a Mac host

If you’re desperately trying to get the `Menu` button in an [Android x86](http://www.android-x86.org) installation working under [VirtualBox](http://www.virtualbox.org) on a Mac OS X host – whose keyboard of course doesn’t have this “context” / “menu” key Windows keyboards have on the right – you might find the touch-only-device mode in Android x86 handy:

1. Click on the clock in the status bar to enable / disable this mode altogether
2. A swipe from the left to the right emulates the `Menu` button function
3. A swipe from right to left emulates the `Back` button function
4. Simply clicking on the status bar brings you to the `Home` screen

([Source](http://www.android-x86.org/documents/touch-only-device-howto))

vsftpd setup – the missing information

So I set up vsftpd on my Debian box the other day. I wanted a simple virtual users setup, so I created `/etc/vsftpd`, moved and symlinked my `vsftpd.conf` into this directory (to keep Debian happy) and also added a `/etc/vsftpd/users.txt` file – the source for my `db(1)` database that pam should use, after I compiled it with

$ cd /etc/vsftpd && db4.6_load -T -t hash -f users.txt users.db

Now that the database existed I went to `/etc/pam.d/vsftpd` and configured it there

session optional pam_keyinit.so force revoke
auth required /lib/security/pam_userdb.so \
db=/etc/vsftpd/users.db
account required /lib/security/pam_userdb.so \
db=/etc/vsftpd/users.db

but when I tried to log in, vsftpd always reported `530: Login incorrect` (and of course I specified an existing user with a correct password). So what went wrong?

After struggling with it for quite some time I noticed that my `/var/log/auth.log` contained output from pam:

vsftpd: pam_userdb(vsftpd:auth): Verify user `foo’ with a password
vsftpd: pam_userdb(vsftpd:auth): user_lookup: could not open database `/etc/vsftpd/users.db’: No such file or directory

Huh?! Of course `/etc/vsftpd/users.db` exists – though it is only read-/writable by root (600), this shouldn’t matter much, because vsftpd runs as root anyways.

Well, the nice thing about the internet is that there is usually at least one person who already had the same problem like you and eventually solved it – [and that was the case here as well](http://www.linuxquestions.org/questions/linux-networking-3/vsftpd-pam-authentication-286864/):

It turned out that pam_userdb.so silently appends *`.db`* to the given path, so all I had to do to make it work was stripping off my `.db` in `/etc/pam.d/vsftpd`:

session optional pam_keyinit.so force revoke
auth required /lib/security/pam_userdb.so \
db=/etc/vsftpd/users
account required /lib/security/pam_userdb.so \
db=/etc/vsftpd/users

If you look into `pam_userdb(8)` you won’t find any hint about that – even worse, the example in the man page uses the explicit `.db` suffix as well (at least here on Lenny).

Anyways, I have now an easy-to-manage ftp server and one reason less to trust anyhow into DropBox and friends ­čÖé

Einf├╝hrung die Versionsverwaltung mit monotone

[Mathias Weidner](http://weidner.in-bad-schmiedeberg.de/) hat eine deutschsprachige Einf├╝hrung in die Versionverwaltung mit monotone [ver├Âffentlicht](http://www.lulu.com/product/paperback/-/16177790). Er behandelt darin die Grundlagen der verteilten Versionsverwaltung, die ersten Schritte mit monotone, sowie die t├Ąglich anfallende Arbeitspraxis mit einem Versionskontrollsystem. In sp├Ąteren Kapiteln widmet sich Mathias auch erweiterten Themen, etwa wie monotone auf die individuellen Bed├╝rfnisse des Nutzers angepasst werden kann und liefert weitere n├╝tzliche Hinweise f├╝r Ein- und Umsteiger von anderen Versionskontrollsystemen.

Das Buch ist [CC BY-SA 3.0](http://creativecommons.org/licenses/by-sa/3.0/de/) lizensiert und kann als [Paperback ├╝ber lulu](http://www.lulu.com/product/paperback/-/16177790) bezogen werden. Eine [Vorversion in PDF-Format](http://weidner.in-bad-schmiedeberg.de/computer/rcs/monotone/drcs-monotone-brevier.html) ist ebenfalls verf├╝gbar; da der Autor die Quellen selbst in monotone verwaltet, sollten auch diese demn├Ąchst verf├╝gbar sein.

Vielen Dank an Mathias f├╝r seine Bem├╝hungen!

Taxbird nun in MacPorts verf├╝gbar

Der ein oder andere kennt [Stefan Siegls](http://blogg.brokenpipe.de/) kleines Programm [Taxbird](http://www.taxbird.de) eventuell schon: Es erleichtert Selbstst├Ąndigen unter Linux die Abgabe von Umsatzsteuervoranmeldungen gegen├╝ber dem ├Ârtlichen Finanzamt.

Mac-User blickten jedoch bislang weitesgehend in die R├Âhre, da der offizielle Elster-Client bis heute nur unter Windows verf├╝gbar ist. Da die Komponenten von Taxbird (die mit Gtk geschriebene GUI und eine Bibliothek zum Datentransfer, die auf den passenden Namen “libgeier” h├Ârt), Standard-Bibliotheken und Tools ben├Âtigt, habe ich mich an einen Port gemacht und diesen [heute fertiggestellt](https://trac.macports.org/browser/trunk/dports/finance/taxbird/Portfile).

Wer das ausprobieren m├Âchte, der m├Âge einfach `sudo port install taxbird` ausf├╝hren. Beim ersten Start erkundigt sich Taxbird nach `html2ps`, welches optional zur ├ťbersetzung des HTML-Reports in PostScript genutzt werden k├Ânnte. Ich habe hierf├╝r bislang auf einen weiteren Port verzichtet, da html2ps weder ├╝ber eine Standardinstallationsroutine verf├╝gt und au├čerdem etliche weitere Abh├Ąngigkeiten mit sich bringen w├╝rde. Die HTML-Reports sollten daher vor dem Versand einfach abgespeichert werden.

Feedback ist willkommen!

ACLs on Mac OS X

This is a short follow-up of an earlier post where I explained how one can set ACLs on FreeBSD. Today now I’ll do the same on another BSD variant, namely Mac OS X, and guess what, the guys from Cupertino implemented ACL management in a completely different manner.

The first thing to notice is that starting with Mac OS X 10.6 (Snow Leopard) ACLs are always enabled and cannot be disabled as in earlier versions. All ACL commands are baked into the `chmod` command and parsed from a string you give it with the ‘+a’ option. The basic syntax here is

$ chmod (+|-|=)a#? ‘ (allow|deny)

Since there is no `setfacl` on Mac OS X, there is no `getfacl` either, so ACLs are instead queried by the special option `-e` of `ls`:

$ ls -le .
[…]
-rw-r–r–+ 1 john users 175 5 Jun 00:23 foo
0: user:dave allow write

Permissions include the usual `read`, `write`, `delete`, `add_file`, and `add_subdirectory` as well as more exotic ones like `{read,write}extattr`, `{read,write}writesecurity` and `chown`. (Read up `chmod`’s man page what these are for.)

There are, however, two more important ones to notice, namely `file_inherit` and `directory_inherit`. These two let you spread your permissions nicely to sub objects and thus let you for example set up a directory, in which a pool of users is allowed to access, modify and delete each other’s files:

$ chmod +a ‘john allow read,write,delete,add_file,add_subdirectory,file_inherit,directory_inherit’ /data
$ chmod +a ‘dave allow read,write,delete,add_file,add_subdirectory,file_inherit,directory_inherit’ /data

The above example gives `john` and `dave` inherited read, write and delete permissions to all file objects underneath `/data`.

Since ACLs are executed in order, they can also be set in an ordered manner. `chmod` has the `+a#` option for that, where `#` is the position into which the ACL should be added. Similarily, existing ACLs can be edited with `=a#`, where again `#` marks the position of the ACL to edit, and deleted with `-a#`.

Finally, if one wants to get rid of all ACLs of a specific node, `chmod -N ` will do the job.

Thats it, have fun playing with ACLs on Mac OS X!

SQLite to MySQL

Migrating a database dump from SQLite to MySQL can be somewhat of a hassle. After various trials I came up with the following that worked for me quite well:

echo .dump | sqlite3 mydb.db |\
egrep -v “\b(BEGIN TRANSACTION|COMMIT|PRAGMA|sqlite_sequence)\b” |\
perl -pe ‘s/^([^’\””]*)”([^”]+)”/\1`\2`/’ |\
perl -pe ‘s/\bautoincrement\b/auto_increment/’ |\
mysql -uroot mydb

The most important line is probably line 3: SQLite encapsulates all table and column names in double quotes and this is not understood by MySQL, so we’re replacing them with backticks. One must be careful here, though, because data INSERTs might also contain double quotes and to avoid having these wrongly replaced as well we only replace them until we encounter the first single quote (these are used in SQLite to encapsulate strings).

Line 3 might also have to be called several times in a row in case multi-column indexes are part of the schema as well, as it will only replace the very first, but no subsequent matches. (I couldn’t get zero-width lookbehind to work properly to remedy this problem; help is welcome.)

jazzlib – an alternative for reading ZIP files in Java

Java had zip-reading capabilities for a long time, naturally because `jar` files are simply compressed zip files with some meta data. The needed classes reside in the `java.util.zip` namespace and are `ZipInputStream` and `ZipEntry`.

Recently, however, `ZipInputStream` gave me a huge headache. My use case was as simple as

* read the zip entries of a list of zip files (each varying in size, but usually around 20MB)
* skip to the zip entry that has a certain name (a single text file with only two bytes of contents)
* read the contents of this zip entry and close the zip

Doing this for about 25 files took my Pentium D (2GHz) with 3GB of RAM roughly **20 seconds**. Wow, 20 seconds really? I created a test case and profiled the code in question separately with [YourKit](http://www.yourkit.com) (which is a really great tool, by the way!):

It got stuck quite a bit in `java.util.zip.Inflater.inflateBytes` – but that seemed to use native code, so I couldn’t profile any further.

So I went on and searched for an alternative of `java.util.zip` – and luckily I found one with [jazzlib](http://jazzlib.sourceforge.net), which provides a pure Java implementation for ZIP compression and decompression. This library is GPL-licensed (with a small exception clause to prevent the pervasiveness of the GPL) and comes in two versions, one that duplicates the single library classes underknees `java.util.zip` (as a drop-in replacement for JDK versions where this is missing) and one that comes in its own namespace, `net.sf.jazzlib`.

After I went for the second version, I restarted my test and it only took about **7 seconds** this time. At first I thought that there must be some downside to this approach, so I checked the timings for a complete decompression of the archive, but the timings here were on par with the ones from `java.util.zip` (roughly 5 seconds for a single 20MB file).

I haven’t tested compression speed, because it doesn’t matter much for my use case, but the decompression speed alone is astonishing. I wonder why nobody else stumbled upon these performance problems before…

Indefero 1.1 released

I’m pleased to announce the immediate release of [Indefero 1.1](http://projects.ceondo.com/p/indefero). This release features support for another version control system, [monotone](http://www.monotone.ca), and comes with tons of smaller improvements and bug fixes.

A full list of changes can be found in the [News](http://projects.ceondo.com/p/indefero/page/News/) document.

Many thanks to all the contributors!